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Starts 8 June 2025 15:22

Ends 8 June 2025

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Segmentation-free Analysis of Submicron-resolution Spatial Transcriptomics

Discover a segmentation-free approach to analyzing submicron-resolution spatial transcriptomics in this short talk by Yichen Si from the Eric and Wendy Schmidt Center.
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Broad Institute

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Overview

Discover a segmentation-free approach to analyzing submicron-resolution spatial transcriptomics in this short talk by Yichen Si from the Eric and Wendy Schmidt Center.

Syllabus

  • Introduction to Spatial Transcriptomics
  • Overview of spatial transcriptomics technology
    Importance of spatial resolution in transcriptomics
  • Traditional vs. Segmentation-free Approaches
  • Challenges with traditional segmentation-based methods
    Advantages of a segmentation-free approach
  • Detailed Explanation of the Segmentation-free Method
  • Underlying principles and algorithms
    Tools and software used
  • Application to Submicron-resolution Data
  • Handling high-resolution datasets
    Case studies and examples
  • Technological and Computational Challenges
  • Data processing and storage requirements
    Addressing noise and variability
  • Conclusion
  • Summary of key points
    Future directions in spatial transcriptomics
  • Q&A Session
  • Open floor for questions and discussion

Subjects

Data Science